Remove duplicates tool
[PDF File] Outlook Duplicates - Kernel Data Recovery
https://www.nucleustechnologies.com/userguide/outlook-duplicates.pdf
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A Study on Optimizing MarkDuplicate in Genome …
https://dl.acm.org/doi/pdf/10.1145/3309129.3309134
MarkDuplicate in Picard tool is a Java application and it only uses one single thread to process data. It takes sorted BAM le as input and generates new BAM le with du-plicate reads marked as output. In addition, the user can customize the con guration to remove duplicate reads in the nal output as well. MarkDuplicate is a memory intensive
[PDF File] ChIP-Seq Data Analysis - GitHub Pages
http://bioinformatics-core-shared-training.github.io/ngs-in-bioc/Lectures/Lect6b_ChIP-Seq%20Data%20Analysis.pdf
Global signal profile “histogram”. Enriched (ChIP) libraries show higher number of bases at greater depths. Profile for inputs (no enrichment) drops off more quickly. Gap between sample and input indicates enrichment. QC: Dispersion of coverage. SSD: Standardised Standard Deviation of coverage. Metric for assessment of dispersion of coverage.
[PDF File] The Automated Systematic Search Deduplicator (ASySD): a …
https://www.biorxiv.org/content/biorxiv/early/2021/05/04/2021.05.04.442412.full.pdf
We developed the ASySD to identify and remove bibliographic duplicates from preclinical systematic review searches. The tool allows users to label which reviews should be preferentially maintained (e.g. older citations); and can be accessed either through a web application or integrated programmatically with automated workflows via …
[PDF File] Ablebits Ultimate Suite for Excel - Cheat sheet
https://cdn.ablebits.com/_img-docs/ultimate-suite-getting-started/ultimate-suite-cheat-sheet.pdf
The tool searches for matches or differences by one or several key columns. • Find Duplicate Cells can search for duplicates, duplicates + 1st occurrences, unique cells, or uniques + 1st occurrences in an Excel range. You can identify cells with the same values, formulas, background, or font color. • Remove Dupes Within Cell clears repeated ...
[PDF File] 324-2013: Dealing with Duplicates - SAS Support
https://support.sas.com/resources/papers/proceedings13/324-2013.pdf
OUTPUTTING DUPLICATES WITH PROC SORT. Use PROC SORT to output all observations with unique values of ID to one data set and all observations with non-unique values of ID to another data set. The syntax is: proc sort data=test nouniquekeys uniqueout=singles out=dups; by id; run;
[PDF File] Data Tools: Remove Duplicates
https://resources.careered.com/LCMSFileSharePreview/Resources/AdobePDF/IT254_U2_L6_Data_Tools_Remove_Duplicates.pdf
Data Tools: Remove Duplicates. Duplicates in Excel can cause trouble, forcing formulas to output misleading results. The steps to complete the duplicate removal operation are as follows: Step 1: Select your data. Step 2: Select the Data tab on the top ribbon, and find the Data Tools section. Select “Remove Duplicates.”. Step 3: Select All ...
[PDF File] SciFinder - Search References by Research Topic
https://www.cas.org/sites/default/files/documents/scifinder_search_references_workbook.pdf
Click Preferences in the status bar to view and edit them. Check the box for Remove Duplicate References. SciFinder will automatically remove the duplicate MEDLINE records when a search is conducted. This step is automatic on answer sets that contain up to …
[PDF File] Marking duplicates - University of California, Los Angeles
https://qcb.ucla.edu/wp-content/uploads/sites/14/2016/03/GATKwr12-2-Marking_duplicates.pdf
• Duplicates are not removed, just tagged (unless you request removal) • Downstream tools can read the tag and choose to ignore those reads • Most GATK tools ignore duplicates by default Use cases where you may NOT want to mark duplicates • Amplicon sequencing -> all reads start at same posi7on by design ...
[PDF File] Dealing with Duplicates: Identify, Investigate and Purge
https://www.lexjansen.com/nesug/nesug07/cc/cc13.pdf
Step 1: Purge Exact Duplicates. First, we identify exact duplicates and purge them. The NODUP option in PROC SORT is used to remove the duplicates. The first occurrence of the duplicates is kept and the other duplicates are removed. The DUPOUT option is used to store the records that are purged in case you need to report them.
[PDF File] ATAC-seq with unique molecular identifiers improves
https://www.nature.com/articles/s42003-020-01403-4.pdf
duplicates with mapping coordinates will remove the usable fragments that are not generated by PCR ampliļ¬cation, resulting in information loss, and introducing another kind of bias.
[PDF File] Micro Focus Fortify Audit Workbench User Guide
https://mitreattack.microfocus.com/documentation/fortify-static-code-analyzer-and-tools/1820/AWB_Guide_18.20.pdf
Preface ContactingMicroFocusFortifyCustomerSupport Ifyouhavequestionsorcommentsaboutusingthisproduct,contactMicroFocusFortifyCustomer ...
[PDF File] Micro Focus Fortify Audit Workbench User Guide
https://mitreattack.microfocus.com/documentation/fortify-static-code-analyzer-and-tools/2020/AWB_Guide_20.2.0.pdf
ChangeLog Thefollowingtablelistschangesmadetothisdocument.Revisionstothisdocumentarepublishedonly ifthechangesmadeaffectproductfunctionality. SoftwareRelease/
[PDF File] Data Tools: Remove Duplicates and Consolidate
https://resources.careered.com/LCMSFileSharePreview/Resources/AdobePDF/IT254_U2_L6_Data_Tools_Remove_Duplicates_and_Consolidate.pdf
Within Excel, there are data tools that can be very convenient to organize data, especially when removing duplicate entries and consolidating data. Remove Duplicates: An Excel data tool that will delete any duplicate entries in a list. Advanced Filters: An Excel Sort & Filter tool that will hide duplicate entries in a list. Consolidate: An ...
[PDF File] The Automated Systematic Search Deduplicator (ASySD): a …
https://bmcbiol.biomedcentral.com/counter/pdf/10.1186/s12915-023-01686-z.pdf
of 0.95 to 0.99. The false-positive rate was comparable to human performance, with a specicity of > 0.99. The tool took less than 1 h to identify and remove duplicates within each dataset. Conclusions For duplicate removal in biomedical systematic reviews, ASySD is a highly sensitive, reliable, and time-saving tool.
[PDF File] Excel Find and Remove Duplicates
https://www.myonlinetraininghub.com/cdn/files/Excel_Find_and_Remove_Duplicates.pdf
Remove Duplicates Tool We’ve looked at highlighting, extracting and tagging cells or rows containing duplicates, but sometimes you want to remove duplicates from the original data set, so all you're left with is a unique list ofvalues. There are a couple ways to tackle this.
[PDF File] Excel Find and Remove Duplicates
https://d13ot9o61jdzpp.cloudfront.net/files/Excel_Find_and_Remove_Duplicates.pdf
Remove Duplicates Tool We’ve looked at highlighting, extracting and tagging cells or rows containing duplicates, but sometimes you want to remove duplicates from the original data set, so all you're left with is a unique list ofvalues. There are a couple ways to tackle this.
[PDF File] Considerations for conducting systematic reviews: evaluating …
https://tools.ovid.com/ovidtools/pdf/s13643-021-01583-y.pdf
the number of duplicates identified was 1238, leaving a benchmark set of 1892 unique, de-duplicated references (Fig. 1). Following de-duplication using the default algorithm of each program, 1982 unique references remained in Ovid, after 1148 duplicates had been removed. Using reference management software, the numbers of unique
[PDF File] SUGI 25: Removing Duplicates: PROC SQL Can Help You …
https://support.sas.com/resources/papers/proceedings/proceedings/sugi25/25/cc/25p106.pdf
However, it was unknown if the duplicates existed only in the test group, only in the control group, or if identical account numbers appeared in both groups. Further investigation was needed. PROC SQL: An Investigative Tool PROC SQL was a logical choice for researching the observations with duplicate account numbers because of these three features:
[PDF File] Double Data Entry (DDE) - University of Chicago
https://cri.uchicago.edu/wp-content/uploads/2019/08/REDCap-Double-Data-Entry.pdf
Reviewer – Data Comparison Tool •The Data Comparison Tool is located under Applications on the left hand menu of the project. •This tool may be used for comparing records that have been entered by data entry Persons #1 and #2. •Select a record from the list and click the 'Compare' button. •A comparison table will then be displayed showing
[PDF File] Micro Focus Fortify Audit Workbench User Guide
https://www.microfocus.com/documentation/fortify-static-code-analyzer-and-tools/2310/AWB_Guide_23.1.0.pdf
Contents Preface 9 ContactingMicroFocusFortifyCustomerSupport 9 ForMoreInformation 9 AbouttheDocumentationSet 9 FortifyProductFeatureVideos 9 ChangeLog 10
[PDF File] In Kernel Outlook Duplicate Remover - Kernel Data Recovery
https://www.nucleustechnologies.com/whatsnew/Kernel-Outlook-Duplicates.pdf
is an excellent utility to remove duplicate items like emails, messages, tasks, etc. from your Outlook profiles. It offers two modes of duplicate removal – within the same folder or selected folders. The updated version of Kernel Outlook Duplicate Remover enables users to remove all the duplicate items from their Outlook
FastUniq: A Fast De Novo Duplicates Removal Tool for …
https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0052249&type=printable
[26] and Fulcrum [27] was used successfully to remove duplicates. However, these tools are either not designed for the removal of duplicates in paired short reads, or inefficient with running time ranged from several hours to several days. To accelerate duplicates removal in paired short reads using a de novo strategy, we developed FastUniq.
[PDF File] How to deduplicate PCR - Nature
https://www.nature.com/articles/nmeth.4268.pdf
Marking of PCR duplicates is usually done with software tools such as Picard’s MarkDuplicates, developed at the Broad Institute of Harvard and MIT, or samtools rmdup, developed at the Sanger ...
[PDF File] Identifying Duplicate Variables in a SAS® Data Set
https://www.sas.com/content/dam/SAS/support/en/sas-global-forum-proceedings/2018/1654-2018.pdf
One way to identify duplicate variables is with PROC COMPARE, which is commonly used to compare two data sets, but can also compare variables in the same data set. It can accept a list of variable pairs to compare and determine which variable pairs are identical. This paper shows how to obtain a summary report of identical variables for all ...
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